# Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models

## Documentation for package ‘ncpen’ version 1.0.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

ncpen-package | ncpen: A package for non-convex penalized estimation for generalized linear models
coef.cv.ncpen | coef.cv.ncpen: extracts the optimal coefficients from 'cv.ncpen'.
coef.ncpen | coef.ncpen: extract the coefficients from an 'ncpen' object
control.ncpen | control.ncpen: do preliminary works for 'ncpen'.
cv.ncpen | cv.ncpen: cross validation for 'ncpen'
cv.ncpen.reg | cv.ncpen: cross validation for 'ncpen'
excluded | Check whether a pair should be excluded from interactions.
fold.cv.ncpen | fold.cv.ncpen: extracts fold ids for 'cv.ncpen'.
gic.ncpen | gic.ncpen: compute the generalized information criterion (GIC) for the selection of lambda
interact.data | Construct Interaction Matrix
make.ncpen.data | Create ncpen Data Structure Using a Formula
native_cpp_ncpen_fun_ | Native ncpen function.
native_cpp_nr_fun_ | N/A.
native_cpp_obj_fun_ | Native object function.
native_cpp_obj_grad_fun_ | Native object gradient function.
native_cpp_obj_hess_fun_ | Native object Hessian function.
native_cpp_pen_fun_ | Native Penalty function.
native_cpp_pen_grad_fun_ | Native Penalty Gradient function.
native_cpp_p_ncpen_fun_ | Native point ncpen function.
native_cpp_qlasso_fun_ | Native QLASSO function.
native_cpp_set_dev_mode_ | N/A.
ncpen | ncpen: nonconvex penalized estimation
ncpen.reg | ncpen.reg: nonconvex penalized estimation
plot.cv.ncpen | plot.cv.ncpen: plot cross-validation error curve.
plot.ncpen | plot.ncpen: plots coefficients from an 'ncpen' object.
power.data | Power Data
predict.ncpen | predict.ncpen: make predictions from an 'ncpen' object
sam.gen.ncpen | sam.gen.ncpen: generate a simulated dataset.
same.base | Check whether column names are derivation of a same base.
to.indicators | Construct Indicator Matrix
to.ncpen.x.mat | Convert a 'data.frame' to a 'ncpen' usable 'matrix'.