Package: penetrance
Type: Package
Title: Methods for Penetrance Estimation in Family-Based Studies
Version: 0.1.1
Depends: R (>= 3.5.0)
Imports: clipp, stats, parallel, MASS, kinship2 (>= 1.8.5), graphics,
        grDevices
Authors@R: c(
    person("Nicolas", "Kubista", email = "bmendel@jimmy.harvard.edu", role = c("aut", "cre")),
    person("BayesMendel", "Lab", role = "aut"))
Description: Implements statistical methods for estimating disease penetrance in 
    family-based studies. Penetrance refers to the probability of disease§
    manifestation in individuals carrying specific genetic variants. The package 
    provides tools for age-specific penetrance estimation, handling missing data, 
    and accounting for ascertainment bias in family studies.
    Cite as: Kubista, N., Braun, D. & Parmigiani, G. (2024) <doi:10.48550/arXiv.2411.18816>.
License: GPL-3
URL: https://github.com/nicokubi/penetrance,
        https://nicokubi.github.io/penetrance/
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.2
VignetteBuilder: knitr
SystemRequirements: C++11
Suggests: knitr, rmarkdown, scales, ggplot2, roxygen2, testthat (>=
        3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2025-04-02 18:49:33 UTC; nicolaskubista
Author: Nicolas Kubista [aut, cre],
  BayesMendel Lab [aut]
Maintainer: Nicolas Kubista <bmendel@jimmy.harvard.edu>
Repository: CRAN
Date/Publication: 2025-04-02 19:20:02 UTC
Built: R 4.4.3; ; 2026-01-21 03:14:53 UTC; windows
