arrayQualityMetrics

Quality metrics on ExpressionSets

This package performs quality metrics on ExpressionSet containing microarray data from any platforms, one or two channels. The results are designated to allow the user to rapidly assess the quality of a set of arrays.

Author Audrey Kauffmann, Wolfgang Huber
Maintainer Audrey Kauffmann

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("arrayQualityMetrics")

Vignettes (Documentation)

Package Downloads

arrayQualityMetrics.pdf
Source arrayQualityMetrics_1.2.1.tar.gz
Windows binary arrayQualityMetrics_1.2.1.zip
OS X binary arrayQualityMetrics_1.2.1.tgz

Details

biocViews
Depends R, Biobase, geneplotter, genefilter, vsn, RColorBrewer, affyPLM, simpleaffy, CCl4, lattice, latticeExtra, grid
Suggests
Imports
SystemRequirements
License LGPL version 2 or newer
URL
dependsOnMe
suggestsMe