| Package | Maintainer | Title |
|---|---|---|
| adSplit | Claudio Lottaz | Annotation-Driven Clustering |
| BicARE | Pierre Gestraud , | BicARE |
| ChemmineR | Y. Eddie Cao | A Compound Data Mining Framework |
| clusterStab | James W. MacDonald | Compute cluster stability scores for microarray data |
| CORREP | Dongxiao Zhu | Multivariate Correlation Estimator and Statistical Inference Procedures. |
| ctc | Antoine Lucas | Cluster and Tree Conversion. |
| flowClust | Raphael Gottardo | Clustering for Flow Cytometry |
| geneRecommender | Greg Hather | A gene recommender algorithm to identify genes coexpressed with a query set of genes |
| hopach | Katherine S. Pollard | Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH) |
| maanova | Hyuna Yang | Tools for analyzing Micro Array experiments |
| made4 | Aedin Culhane | Multivariate analysis of microarray data using ADE4 |
| maigesPack | Gustavo H. Esteves | Functions to handle cDNA microarray data, including several methods of data analysis |
| MantelCorr | Brian Steinmeyer | Compute Mantel Cluster Correlations |
| Mfuzz | Matthias Futschik | Soft clustering of time series gene expression data |
| MLInterfaces | V. Carey | Uniform interfaces to R machine learning procedures for data in Bioconductor containers |
| puma | Richard Pearson | Propagating Uncertainty in Microarray Analysis |
| SAGx | Per Broberg, | Statistical Analysis of the GeneChip |