hgu2beta7ENZYME2PROBE {hgu2beta7} | R Documentation |
hgu2beta7ENZYME2PROBE maps Enzyme Commission numbers to probe identifiers representing genes whose products exhibit the functions of the enzymes labeled by the Commission Numbers
Enzyme Commission numbers are assigned by the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology http://www.chem.qmw.ac.uk/iubmb/enzyme/ to allow enzymes to be identified.
An Enzyme Commission number is of the format EC x.y.z.w, where x, y, z, and w are numeric numbers. In hgu2beta7ENZYME2PROBE, EC is dropped from the Enzyme Commission numbers.
Enzyme Commission numbers have corresponding names that describe the functions of enzymes in such a way that EC x is a more general description than EC x.y that in turn is a more general description than EC x.y.z. The top level EC numbers and names are listed below:
EC 1 oxidoreductases
EC 2 transferases
EC 3 hydrolases
EC 4 lyases
EC 5 isomerases
EC 6 ligases
The EC name for a given EC number can be viewed at http://www.chem.qmul.ac.uk/iupac/jcbn/index.html#6
Mappings were based on data provided by:
KEGG:ftp://ftp.genome.ad.jp/pub/kegg/pathways. Built: Release 33.0 (January 2005)
Package built Wed Feb 16 23:32:20 2005
ftp://ftp.genome.ad.jp/pub/kegg/pathways
# Convert to a list xx <- as.list(hgu2beta7ENZYME2PROBE) if(length(xx) > 0){ # Gets the probe ids for the first five enzyme #commission numbers xx[1:5] # Get the first one xx[[1]] }