DEDS

Differential Expression via Distance Summary for Microarray Data

This library contains functions that calculate various statistics of differential expression for microarray data, including t statistics, fold change, F statistics, SAM, moderated t and F statistics and B statistics. It also implements a new methodology called DEDS (Differential Expression via Distance Summary), which selects differentially expressed genes by integrating and summarizing a set of statistics using a weighted distance approach.

Author Yuanyuan Xiao , Jean Yee Hwa Yang .
Maintainer Yuanyuan Xiao

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("DEDS")

Documentation

DEDS Overview PDF R Script
Reference Manual

Details

biocViews
Depends
R , methods
Imports
Suggests
System Requirements
License LGPL
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog

Package Downloads

Package source DEDS_1.18.0.tar.gz
Windows binary DEDS_1.18.0.zip
MacOS X 10.4 (Tiger) binary DEDS_1.18.0.tgz
MacOS X 10.5 (Leopard) binary DEDS_1.18.0.tgz
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