GOstats

Tools for manipulating GO and microarrays.

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Author	R. Gentleman and S. Falcon
Maintainer	Robert Gentleman

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GOstats")

Documentation

Hypergeometric Tests Using GOstats	PDF	R Script
Visualizing Data Using GOstats	PDF	R Script
Reference Manual

Details

biocViews	Bioinformatics , Annotation , GO , MultipleComparisons
Depends	Biobase , Category , graph
Imports	AnnotationDbi , Biobase , Category , GO.db , RBGL , annotate , graph , methods , stats
Suggests	hgu95av2.db , ALL , GO.db , annotate , multtest , genefilter , RColorBrewer , Rgraphviz , xtable , SparseM
System Requirements
License	Artistic-2.0
URL
Depends On Me	oneChannelGUI
Imports Me	affycoretools
Suggests Me	BiocCaseStudies , globaltest , GSEAlm , qpgraph , safe
Development History	Bioconductor Changelog

Package Downloads

Package source	GOstats_2.10.0.tar.gz
Windows binary	GOstats_2.10.0.zip
MacOS X 10.4 (Tiger) binary	GOstats_2.10.0.tgz
MacOS X 10.5 (Leopard) binary	GOstats_2.10.0.tgz
Package Downloads Report	Downloads Stats