mdqc

Mahalanobis Distance Quality Control for microarrays

MDQC is a multivariate quality assessment method for microarrays based on quality control (QC) reports. The Mahalanobis distance of an array's quality attributes is used to measure the similarity of the quality of that array against the quality of the other arrays. Then, arrays with unusually high distances can be flagged as potentially low-quality.

Author Justin Harrington
Maintainer Gabriela Cohen-Freue

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("mdqc")

Documentation

Introduction to MDQC PDF R Script
Reference Manual

Details

biocViews
Depends
R , cluster , MASS
Imports
Suggests
System Requirements
License LGPL version 2 or newer
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog

Package Downloads

Package source mdqc_1.6.0.tar.gz
Windows binary mdqc_1.6.0.zip
MacOS X 10.4 (Tiger) binary mdqc_1.6.0.tgz
MacOS X 10.5 (Leopard) binary mdqc_1.6.0.tgz
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