miRNApath

miRNApath: Pathway Enrichment for miRNA Expression Data

This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.

Author James M. Ward with contributions from Yunling Shi, Cindy Richards, John P. Cogswell
Maintainer James M. Ward

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("miRNApath")

Documentation

miRNApath: Pathway Enrichment for miRNA Expression Data PDF R Script
Reference Manual

Details

biocViews
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methods , R
Imports
Suggests
System Requirements
License LGPL-2.1
URL
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Development History Bioconductor Changelog

Package Downloads

Package source miRNApath_1.4.0.tar.gz
Windows binary miRNApath_1.4.0.zip
MacOS X 10.4 (Tiger) binary miRNApath_1.4.0.tgz
MacOS X 10.5 (Leopard) binary miRNApath_1.4.0.tgz
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