Streamer

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see Streamer.

Enabling stream processing of large files

Bioconductor version: 3.2

Large data files can be difficult to work with in R, where data generally resides in memory. This package encourages a style of programming where data is 'streamed' from disk into R via a `producer' and through a series of `consumers' that, typically reduce the original data to a manageable size. The package provides useful Producer and Consumer stream components for operations such as data input, sampling, indexing, and transformation; see package?Streamer for details.

Author: Martin Morgan, Nishant Gopalakrishnan

Maintainer: Martin Morgan <mtmorgan at fredhutch.org>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Streamer")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Streamer")

Details

Package Archives

Follow Installation instructions to use this package in your R session.