To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

phastCons100way.UCSC.hg19

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see phastCons100way.UCSC.hg19.

UCSC phastCons conservation scores for hg19

Bioconductor version: 3.2

Store UCSC phastCons conservation scores for the human genome (hg19) calculated from multiple alignments with other 99 vertebrate species.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg19")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

biocViews	AnnotationData, Genetics, Homo_sapiens, PhastConsDb
Version	3.2.0
License	Artistic-2.0
Depends	R (>= 3.0.0), VariantFiltering(>= 1.5.24)
Imports	utils, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	VariantFiltering

Follow Installation instructions to use this package in your R session.

Package Source	phastCons100way.UCSC.hg19_3.2.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/phastCons100way.UCSC.hg19/
Package Downloads Report	Download Stats

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