To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

In most cases, you don't need to download the package archive at all.

SomaticCancerAlterations

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see SomaticCancerAlterations.

Somatic Cancer Alterations

Bioconductor version: 3.2

Collection of somatic cancer alteration datasets

Author: Julian Gehring (EMBL Heidelberg)

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("SomaticCancerAlterations")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SomaticCancerAlterations")

HTML		SomaticCancerAlterations - HTML
PDF		Reference Manual

biocViews	CancerData, ExperimentData, Genome, NCI, Project1000genomes
Version	1.6.1
License	GPL-3
Depends	R (>= 3.0.0)
Imports	GenomicRanges, exomeCopy, stringr, IRanges
LinkingTo
Suggests	testthat, ggbio, ggplot2, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	SomaticSignatures
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SomaticCancerAlterations_1.6.1.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/SomaticCancerAlterations/
Package Downloads Report	Download Stats

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