- Home
- Bioconductor 3.2
- Experiment Packages
- davidTiling
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("davidTiling")
In most cases, you don't need to download the package archive at all.
davidTiling
|
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see davidTiling.
Data and analysis scripts for David, Huber et al. yeast tiling array paper
Bioconductor version: 3.2
This package contains the data for the paper by L. David et al. in PNAS 2006 (PMID 16569694): 8 CEL files of Affymetrix genechips, an ExpressionSet object with the raw feature data, a probe annotation data structure for the chip and the yeast genome annotation (GFF file) that was used. In addition, some custom-written analysis functions are provided, as well as R scripts in the scripts directory.
Author: Wolfgang Huber <huber at ebi.ac.uk>, Joern Toedling <toedling at ebi.ac.uk>
Maintainer: Wolfgang Huber <huber at ebi.ac.uk>
Citation (from within R,
enter citation("davidTiling")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("davidTiling")
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, Genome, MicroarrayData, ReproducibleResearch, Saccharomyces_cerevisiae_Data |
| Version | 1.10.0 |
| License | LGPL |
| Depends | R (>= 2.10), Biobase(>= 2.5.5), tilingArray, GO.db |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://www.ebi.ac.uk/huber |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | davidTiling_1.10.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/davidTiling/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
