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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")
In most cases, you don't need to download the package archive at all.
minionSummaryData
|
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see minionSummaryData.
Summarised MinION sequencing data published by Ashton et al. 2015
Bioconductor version: 3.2
Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.
Author: Mike Smith [aut, cre]
Maintainer: Mike Smith <grimbough at gmail.com>
Citation (from within R,
enter citation("minionSummaryData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("minionSummaryData")
| HTML | Creating example MinION summary dataset | |
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | ExperimentData, SequencingData |
| Version | 1.0.0 |
| License | MIT + file LICENSE |
| Depends | R (>= 3.2.0) |
| Imports | |
| LinkingTo | |
| Suggests | BiocStyle, knitr, rmarkdown |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | IONiseR |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | minionSummaryData_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/minionSummaryData/ |
| Package Downloads Report | Download Stats |
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