To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ind1KG")

In most cases, you don't need to download the package archive at all.

ind1KG

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see ind1KG.

Data from 1000 Genomes, NA19240 (female) chr6 excerpt

Bioconductor version: 3.2

Elements of samtools/bioc workflow for dealing with personal sequence focusing on identification and interpretation of rare variants

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ind1KG")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ind1KG")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ind1KG")

biocViews	ExperimentData, Genome, MicroarrayData, SNPData
Version	0.8.0
License	Artistic-2.0
Depends	R (>= 2.10.1), chopsticks
Imports
LinkingTo
Suggests	Rsamtools, rtracklayer, GenomicFeatures, org.Hs.eg.db, SNPlocs.Hsapiens.dbSNP.20090506, TxDb.Hsapiens.UCSC.hg18.knownGene, lumiHumanIDMapping, GGBase, GGtools, hmyriB36
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	ind1KG_0.8.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/ind1KG/
Package Downloads Report	Download Stats

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